5. Layer python2_scientific

5.1. Overview

The python3_scientific layer is a set of Python 3 libraries and tools devoted to scientific development.

5.2. Metadata

5.2.1. Layer Home

/opt/metwork-mfext-0.8/opt/python2_scientific

5.2.3. Dependencies

5.2.4. Extra-environment (loaded after layer load)

MAGPLUS_HOME={MFEXT_HOME}/opt/python2_scientific
MAGPLUS_QUIET=ON

5.3. Packages

Name

Version

Description

Home Page

Cartopy

0.13.1

Cartopy is a Python package designed for geospatial data processing in order to produce maps and other geospatial data analyses. Cartopy makes use of the powerful PROJ.4, numpy and shapely libraries and includes a programatic interface built on top of Matplotlib for the creation of publication quality maps.

https://scitools.org.uk/cartopy

Click

7.0

Composable command line interface toolkit

https://palletsprojects.com/p/click/

Cython

0.29.12

The Cython compiler for writing C extensions for the Python language.

http://cython.org/

Fiona

1.8.6

FIONA is OGR s neat and nimble API for Python programmers

https://github.com/Toblerity/Fiona

GDAL

2.2.4

GDAL: Geospatial Data Abstraction Library

http://www.gdal.org

Magics

1.0.6

Python interface to plot meteorological data in GRIB, NetCDF and BUFR.

https://github.com/ecmwf/magics-python

MetPy

0.10.2

Collection of tools for reading, visualizing andperforming calculations with weather data.

http://github.com/Unidata/MetPy

Pillow

6.1.0

Python Imaging Library (Fork)

http://python-pillow.org

Pint

0.9

Physical quantities module

https://github.com/hgrecco/pint

SQLAlchemy

1.3.5

Database Abstraction Library

http://www.sqlalchemy.org

Shapely

1.6.4.post2

Geometric objects, predicates, and operations

https://github.com/Toblerity/Shapely

attrs

19.1.0

Classes Without Boilerplate

https://www.attrs.org/

backports.tempfile

1.0

Backport of new features in Python s tempfile module

https://github.com/pjdelport/backports.tempfile

backports.weakref

1.0.post1

Backport of new features in Python s weakref module

https://github.com/pjdelport/backports.weakref

cdsapi

0.1.4

Climate Data Store API

https://software.ecmwf.int/stash/projects/CDS/repos/cdsapi

certifi

2019.3.9

Python package for providing Mozilla s CA Bundle.

https://certifi.io/

cf-units

2.1.1

Units of measure as defined by the Climate and Forecast (CF) metadata conventions, supporting Unidata/UCAR UDUNITS-2 library, and the cftime calendar functionality

https://scitools.org.uk/cf-units

cftime

1.0.3.4

Time-handling functionality from netcdf4-python

https://pypi.org/project/cftime

click-plugins

1.1.1

An extension module for click to enable registering CLI commands via setuptools entry-points.

https://github.com/click-contrib/click-plugins

cligj

0.5.0

Click params for commmand line interfaces to GeoJSON

https://github.com/mapbox/cligj

contextlib2

0.5.5

Backports and enhancements for the contextlib module

http://contextlib2.readthedocs.org

cycler

0.10.0

Composable style cycles

http://github.com/matplotlib/cycler

dask

1.2.2

Parallel PyData with Task Scheduling

https://github.com/dask/dask/

decorator

4.4.0

Better living through Python with decorators

https://github.com/micheles/decorator

eccodes

2.13.0

ecCodes is a package developed by ECMWF which provides an application programming interface and a set of tools for decoding and encoding messages in the following formats: WMO FM-92 GRIB edition 1 and edition 2 WMO FM-94 BUFR edition 3 and edition 4 WMO GTS abbreviated header (only decoding).

https://www.ecmwf.int/en/computing/software

enum34

1.1.6

Python 3.4 Enum backported to 3.3, 3.2, 3.1, 2.7, 2.6, 2.5, and 2.4

https://bitbucket.org/stoneleaf/enum34

esmf

7_0_2

Earth System Modeling Framework (ESMF) Python Interface (ESMPy)

http://www.earthsystemmodeling.org

funcsigs

1.0.2

Python function signatures from PEP362 for Python 2.6, 2.7 and 3.2+

http://funcsigs.readthedocs.org

graphviz

0.11.1

Simple Python interface for Graphviz

https://github.com/xflr6/graphviz

h5py

2.9.0

Read and write HDF5 files from Python

http://www.h5py.org

ipython-genutils

0.2.0

Vestigial utilities from IPython

http://ipython.org

iris

2.1.0

IRIS is a powerful, format-agnostic, and community-driven Python library for analysing and visualising Earth science data

https://scitools.org.uk/iris

kiwisolver

1.1.0

A fast implementation of the Cassowary constraint solver

https://github.com/nucleic/kiwi

lxml

4.3.4

Powerful and Pythonic XML processing library combining libxml2/libxslt with the ElementTree API.

http://lxml.de/

matplotlib

2.2.2

Python plotting package

http://matplotlib.org

munch

2.3.2

A dot-accessible dictionary (a la JavaScript objects).

http://github.com/Infinidat/munch

netCDF4

1.5.1.2

Provides an object-oriented python interface to the netCDF version 4 library.

http://github.com/Unidata/netcdf4-python

numpy

1.16.4

NumPy is the fundamental package for array computing with Python.

https://www.numpy.org

palettable

3.2.0

Color palettes for Python

https://jiffyclub.github.io/palettable/

pandas

0.24.2

Powerful data structures for data analysis, time series, and statistics

http://pandas.pydata.org

pathlib

1.0.1

Object-oriented filesystem paths

https://pathlib.readthedocs.org/

pngquant

1.0.6

A Python Wrapper of pngquant

https://github.com/Brightcells/pngquant

pooch

0.5.2

Pooch manages your Python library s sample data files: it automatically downloads and stores them in a local directory, with support for versioning and corruption checks.

https://github.com/fatiando/pooch

pycurl

7.43.0.3

PycURL – A Python Interface To The cURL library

http://pycurl.io/

pygraphviz

1.5

PYGRAPHVIZ is a Python interface to Graphviz

http://pygraphviz.github.io/

pyke

1.1.1

PYKE integrates a form of Logic Programming into Python by providing a knowledge engine that can Do both forward-chaining (data driven) and backward-chaining (goal directed) inferencing Automatically generate Python programs by assembling individual Python functions into complete call graphs.

https://sourceforge.net/projects/pyke/

pyproj

1.9.6

Python interface to PROJ.4 library

https://github.com/jswhit/pyproj

pyshp

2.1.0

Pure Python read/write support for ESRI Shapefile format

https://github.com/GeospatialPython/pyshp

python-dateutil

2.8.0

Extensions to the standard Python datetime module

https://dateutil.readthedocs.io

pytz

2019.1

World timezone definitions, modern and historical

http://pythonhosted.org/pytz

scipy

1.1.0

SciPy: Scientific Library for Python

https://www.scipy.org

seaborn

0.9.0

seaborn: statistical data visualization

https://seaborn.pydata.org

subprocess32

3.5.4

A backport of the subprocess module from Python 3 for use on 2.x.

https://github.com/google/python-subprocess32

toolz

0.10.0

List processing tools and functional utilities

https://github.com/pytoolz/toolz/

traitlets

4.3.2

Traitlets Python config system

http://ipython.org

xarray

0.11.3

N-D labeled arrays and datasets in Python

https://github.com/pydata/xarray

(56 packages)